PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_C9DF68E53.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 451aa    MW: 47844.2 Da    PI: 9.0109
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_C9DF68E53.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.2e-30242301159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg Hnh+
  Traes_7AS_C9DF68E53.2 242 MNDGCQWRKYGQKISKGNPCPRAYYRCTIAtGCPVRKQVQRCAEDMSILITTYEGAHNHP 301
                            58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-31227301IPR003657WRKY domain
SuperFamilySSF1182905.75E-27235302IPR003657WRKY domain
PROSITE profilePS5081127.921237303IPR003657WRKY domain
SMARTSM007742.3E-36242302IPR003657WRKY domain
PfamPF031062.5E-26243301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MIKGDQRQLG GHEDRLKDQT FMLVLQMGDD HRASDGKFFR FLQNQSSAKK EAQEDKIAST  60
RAEMGEVRKE NERLKTMLSR MVEDHRSLQK QFDVLHQQGR GKNLAMGSPE HTSSADGVKD  120
PRFVSLRLGT SASTSRQDMG EEIRTGTNNA DGKCISLGLS SGKAIGAAGQ SEMKVQPDVL  180
TLSPGGSSED DAATETTTTS SKVPKNPRST GGGAEAEEEV AQQPLAKKAR VSVRARCDTP  240
TMNDGCQWRK YGQKISKGNP CPRAYYRCTI ATGCPVRKQV QRCAEDMSIL ITTYEGAHNH  300
PLSPSAAAMA STTSAAASML MSGSSTSLGF PSVASSLHGL RFGLPAATTF DPSSHLSGRP  360
FFLPAAAGAS ISATPSYPTI TLDLTSQTAS QQAFSLSNTN RFSSSFPDSH GHSSSAGRYP  420
STNFSFSGSG ASSLPGATAW PAGVGSYLSY G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20229304175WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643469.11e-136PREDICTED: probable WRKY transcription factor 72 isoform X2
TrEMBLW5HI920.0W5HI92_WHEAT; Uncharacterized protein
STRINGMLOC_60283.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.11e-55WRKY DNA-binding protein 61
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]